| Line | Branch | Exec | Source |
|---|---|---|---|
| 1 | // | ||
| 2 | // SPDX-FileCopyrightInfo: Copyright © DuMux Project contributors, see AUTHORS.md in root folder | ||
| 3 | // SPDX-License-Identifier: GPL-3.0-or-later | ||
| 4 | // | ||
| 5 | /*! | ||
| 6 | * \file | ||
| 7 | * | ||
| 8 | * \brief Some tests for the grid creator | ||
| 9 | * \note This can/should be extended | ||
| 10 | */ | ||
| 11 | |||
| 12 | #ifndef DUMUX_TEST_IO_GRIDMANAGER_TESTS_HH | ||
| 13 | #define DUMUX_TEST_IO_GRIDMANAGER_TESTS_HH | ||
| 14 | |||
| 15 | #include <dune/grid/common/datahandleif.hh> | ||
| 16 | #include <dune/grid/common/mcmgmapper.hh> | ||
| 17 | #include <dune/grid/io/file/vtk.hh> | ||
| 18 | |||
| 19 | #include <dumux/io/grid/gridmanager.hh> | ||
| 20 | #include <dumux/discretization/method.hh> | ||
| 21 | #include <dumux/common/gridcapabilities.hh> | ||
| 22 | |||
| 23 | namespace Dumux { | ||
| 24 | |||
| 25 | /*! | ||
| 26 | * \brief data handle for parallel communication which takes | ||
| 27 | * the minimum non-zero values that are attached to vertices | ||
| 28 | */ | ||
| 29 | template <class GridView> | ||
| 30 | class VertexHandleNonZeroMin | ||
| 31 | : public Dune::CommDataHandleIF< VertexHandleNonZeroMin<GridView>, int > | ||
| 32 | { | ||
| 33 | using Container = std::vector<int>; | ||
| 34 | |||
| 35 | public: | ||
| 36 | 4 | VertexHandleNonZeroMin(Container &container, const GridView &gridView) | |
| 37 | : gridView_(gridView) | ||
| 38 | 8 | , container_(container) | |
| 39 | {} | ||
| 40 | |||
| 41 | ✗ | bool contains(int dim, int codim) const | |
| 42 | { | ||
| 43 | // only communicate vertices | ||
| 44 | ✗ | return codim == dim; | |
| 45 | } | ||
| 46 | |||
| 47 | ✗ | bool fixedSize(int dim, int codim) const | |
| 48 | { | ||
| 49 | // for each vertex we communicate a single field vector which | ||
| 50 | // has a fixed size | ||
| 51 | ✗ | return true; | |
| 52 | } | ||
| 53 | |||
| 54 | template<class EntityType> | ||
| 55 | ✗ | size_t size (const EntityType &e) const | |
| 56 | { | ||
| 57 | // communicate a field type per entity | ||
| 58 | ✗ | return 1; | |
| 59 | } | ||
| 60 | |||
| 61 | template<class MessageBufferImp, class EntityType> | ||
| 62 | 2868 | void gather(MessageBufferImp &buff, const EntityType &e) const | |
| 63 | { | ||
| 64 |
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2868 | int vIdx = gridView_.indexSet().index(e); |
| 65 | 6228 | buff.write(container_[vIdx]); | |
| 66 | 2868 | } | |
| 67 | |||
| 68 | template<class MessageBufferImp, class EntityType> | ||
| 69 | 2868 | void scatter(MessageBufferImp &buff, const EntityType &e, size_t n) | |
| 70 | { | ||
| 71 |
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2868 | int vIdx = gridView_.indexSet().index(e); |
| 72 | int tmp; | ||
| 73 |
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2868 | buff.read(tmp); |
| 74 | using std::min; | ||
| 75 |
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2868 | if (tmp > 0) |
| 76 | { | ||
| 77 |
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3364 | if (container_[vIdx] == 0) |
| 78 | 990 | container_[vIdx] = tmp; | |
| 79 | else | ||
| 80 |
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692 | container_[vIdx] = min(container_[vIdx], tmp); |
| 81 | } | ||
| 82 | 2868 | } | |
| 83 | |||
| 84 | private: | ||
| 85 | const GridView gridView_; | ||
| 86 | Container &container_; | ||
| 87 | }; | ||
| 88 | |||
| 89 | template<class Grid> | ||
| 90 | class GridManagerTests | ||
| 91 | { | ||
| 92 | using GridView = typename Grid::LeafGridView; | ||
| 93 | using Scalar = double; | ||
| 94 | static const int dim = Grid::dimension; | ||
| 95 | using GridManager = typename Dumux::GridManager<Grid>; | ||
| 96 | |||
| 97 | public: | ||
| 98 | |||
| 99 | 6 | static void testBoundaryAndElementMarkers(const std::string& type = "gmsh", | |
| 100 | const std::string& vtkFileName = "test", | ||
| 101 | bool refine = true) | ||
| 102 | { | ||
| 103 | // make the grid manager and initialize the grid | ||
| 104 | 6 | GridManager gridManager; | |
| 105 |
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12 | gridManager.init(); |
| 106 |
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12 | auto gridData = gridManager.getGridData(); |
| 107 |
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6 | const auto& leafGridView = gridManager.grid().leafGridView(); |
| 108 | |||
| 109 | // read the boundary and element markers as well as the rank | ||
| 110 |
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36 | std::vector<int> boundaryMarker, elementMarker, rank; |
| 111 |
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6 | getBoundaryMarkers_(leafGridView, gridData, boundaryMarker); |
| 112 |
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6 | getElementMarkers_(leafGridView, gridData, elementMarker, type); |
| 113 |
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6 | getRank_(leafGridView, rank); |
| 114 | |||
| 115 | // construct a vtk output writer and attach the boundary markers | ||
| 116 |
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30 | Dune::VTKSequenceWriter<typename Grid::LeafGridView> vtkWriter(leafGridView, vtkFileName, ".", ""); |
| 117 |
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12 | vtkWriter.addVertexData(boundaryMarker, "boundaryMarker"); |
| 118 |
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12 | vtkWriter.addCellData(elementMarker, "elementMarker"); |
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12 | vtkWriter.addCellData(rank, "rank"); |
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6 | vtkWriter.write(0); |
| 121 | |||
| 122 |
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6 | if (refine) |
| 123 | { | ||
| 124 | // refine grid once and write out the markers again | ||
| 125 |
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1 | gridManager.grid().globalRefine(1); |
| 126 |
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1 | getBoundaryMarkers_(leafGridView, gridData, boundaryMarker); |
| 127 |
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1 | getElementMarkers_(leafGridView, gridData, elementMarker, type); |
| 128 |
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1 | getRank_(leafGridView, rank); |
| 129 |
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1 | vtkWriter.write(1); |
| 130 | } | ||
| 131 | 6 | } | |
| 132 | |||
| 133 | template<class Marker = int> | ||
| 134 | 12 | static void testElementMarkers(const std::string& type = "gmsh", | |
| 135 | const std::string& vtkFileName = "test", | ||
| 136 | bool refine = true) | ||
| 137 | { | ||
| 138 | // make the grid manager and initialize the grid | ||
| 139 | 12 | GridManager gridManager; | |
| 140 |
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24 | gridManager.init(); |
| 141 |
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24 | auto gridData = gridManager.getGridData(); |
| 142 | |||
| 143 | // read the element markers and the rank | ||
| 144 |
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24 | std::vector<Marker> elementMarker; |
| 145 |
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24 | std::vector<int> rank; |
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12 | getElementMarkers_(gridManager.grid().leafGridView(), gridData, elementMarker, type); |
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12 | getRank_(gridManager.grid().leafGridView(), rank); |
| 148 | |||
| 149 | // construct a vtk output writer and attach the element markers | ||
| 150 |
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36 | Dune::VTKSequenceWriter<typename Grid::LeafGridView> vtkWriter(gridManager.grid().leafGridView(), vtkFileName, ".", ""); |
| 151 |
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24 | vtkWriter.addCellData(elementMarker, "elementMarker"); |
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24 | vtkWriter.addCellData(rank, "rank"); |
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12 | vtkWriter.write(0); |
| 154 | |||
| 155 |
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12 | if (refine) |
| 156 | { | ||
| 157 | // refine grid once and write out the markers again | ||
| 158 |
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12 | gridManager.grid().globalRefine(1); |
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12 | getElementMarkers_(gridManager.grid().leafGridView(), gridData, elementMarker, type); |
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12 | getRank_(gridManager.grid().leafGridView(), rank); |
| 161 |
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12 | vtkWriter.write(1); |
| 162 | } | ||
| 163 | 12 | } | |
| 164 | |||
| 165 | template<class Marker = int> | ||
| 166 | 6 | static void testVertexMarkers(const std::string& type = "dgf", | |
| 167 | const std::string& vtkFileName = "test") | ||
| 168 | { | ||
| 169 | // make the grid manager and initialize the grid | ||
| 170 | 6 | GridManager gridManager; | |
| 171 |
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12 | gridManager.init(); |
| 172 |
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12 | auto gridData = gridManager.getGridData(); |
| 173 | |||
| 174 | // read the element markers and the rank | ||
| 175 |
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12 | std::vector<Marker> vertexMarker; |
| 176 |
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6 | getVertexMarkers_(gridManager.grid().levelGridView(0), gridData, vertexMarker, type); |
| 177 | |||
| 178 | // construct a vtk output writer and attach the element markers | ||
| 179 |
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18 | Dune::VTKSequenceWriter<typename Grid::LevelGridView> vtkWriter(gridManager.grid().levelGridView(0), vtkFileName, ".", ""); |
| 180 |
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12 | vtkWriter.addVertexData(vertexMarker, "vertexData"); |
| 181 |
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6 | vtkWriter.write(0); |
| 182 | 6 | } | |
| 183 | |||
| 184 | private: | ||
| 185 | |||
| 186 | 31 | static void getRank_(const GridView& gridView, std::vector<int>& rank) | |
| 187 | { | ||
| 188 |
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31 | rank.clear(); |
| 189 | 31 | rank.resize(gridView.size(0)); | |
| 190 | |||
| 191 |
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449071 | for(const auto& element : elements(gridView)) |
| 192 | { | ||
| 193 |
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332108 | auto eIdx = gridView.indexSet().index(element); |
| 194 |
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575316 | rank[eIdx] = gridView.comm().rank(); |
| 195 | } | ||
| 196 | 31 | } | |
| 197 | |||
| 198 | template<class GridData, class Marker> | ||
| 199 | 31 | static void getElementMarkers_(const GridView& gridView, | |
| 200 | const GridData& gridData, | ||
| 201 | std::vector<Marker>& elementMarker, | ||
| 202 | const std::string& type) | ||
| 203 | { | ||
| 204 |
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31 | elementMarker.clear(); |
| 205 | 31 | elementMarker.resize(gridView.size(0)); | |
| 206 | |||
| 207 |
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224551 | for(const auto& element : elements(gridView)) |
| 208 | { | ||
| 209 |
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224520 | const auto eIdx = gridView.indexSet().index(element); |
| 210 |
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224520 | if (type == "gmsh") |
| 211 |
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285824 | elementMarker[eIdx] = gridData->getElementDomainMarker(element); |
| 212 |
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81608 | else if (type == "dgf") |
| 213 |
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163216 | elementMarker[eIdx] = gridData->parameters(element)[0]; |
| 214 | ✗ | else if (type == "vtu" || type == "vtk") | |
| 215 | ✗ | elementMarker[eIdx] = gridData->getParameter(element, "elementMarker"); | |
| 216 | else | ||
| 217 | ✗ | DUNE_THROW(Dune::InvalidStateException, "No parameters for type " << type); | |
| 218 | } | ||
| 219 | 31 | } | |
| 220 | |||
| 221 | template<class LevelGridView, class GridData, class Marker> | ||
| 222 | 6 | static void getVertexMarkers_(const LevelGridView& gridView, | |
| 223 | const GridData& gridData, | ||
| 224 | std::vector<Marker>& vertexMarker, | ||
| 225 | const std::string& type) | ||
| 226 | { | ||
| 227 |
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6 | if (type == "gmsh") |
| 228 | ✗ | DUNE_THROW(Dune::InvalidStateException, "Vertex markers are not supported for gmsh grids."); | |
| 229 | |||
| 230 |
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6 | vertexMarker.clear(); |
| 231 | 6 | vertexMarker.resize(gridView.size(Grid::dimension)); | |
| 232 | |||
| 233 |
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30889 | for (const auto& vertex : vertices(gridView.grid().levelGridView(0))) |
| 234 | { | ||
| 235 |
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15434 | const auto vIdx = gridView.indexSet().index(vertex); |
| 236 |
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15434 | if (type == "dgf") |
| 237 |
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30868 | vertexMarker[vIdx] = gridData->parameters(vertex)[0]; |
| 238 | ✗ | else if (type == "vtu" || type == "vtk") | |
| 239 | ✗ | vertexMarker[vIdx] = gridData->getParameter(vertex, "vertexData"); | |
| 240 | else | ||
| 241 | ✗ | DUNE_THROW(Dune::InvalidStateException, "No parameters for type " << type); | |
| 242 | } | ||
| 243 | 6 | } | |
| 244 | |||
| 245 | template<class GridData, class Marker> | ||
| 246 | 7 | static void getBoundaryMarkers_(const GridView& gridView, | |
| 247 | const GridData& gridData, | ||
| 248 | std::vector<Marker>& boundaryMarker) | ||
| 249 | { | ||
| 250 |
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7 | boundaryMarker.clear(); |
| 251 | 7 | boundaryMarker.resize(gridView.size(dim), 0); | |
| 252 | |||
| 253 |
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55359 | for(const auto& element : elements(gridView)) |
| 254 | { | ||
| 255 |
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229292 | for(const auto& intersection : intersections(gridView, element)) |
| 256 | { | ||
| 257 |
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108538 | if (!intersection.boundary()) |
| 258 | continue; | ||
| 259 | |||
| 260 |
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12672 | const auto refElement = referenceElement(element.geometry()); |
| 261 |
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12672 | const auto numVertices = refElement.size(intersection.indexInInside(), 1, dim); |
| 262 | // loop over vertices of the intersection facet | ||
| 263 |
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28936 | for(std::size_t vIdx = 0; vIdx < numVertices; vIdx++) |
| 264 | { | ||
| 265 | // get local vertex index with respect to the element | ||
| 266 |
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38016 | auto vIdxLocal = refElement.subEntity(intersection.indexInInside(), 1, vIdx, dim); |
| 267 |
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21702 | auto vIdxGlobal = gridView.indexSet().subIndex(element, vIdxLocal, dim); |
| 268 | |||
| 269 | // make sure we always take the lowest non-zero marker (problem dependent!) | ||
| 270 |
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43404 | if (boundaryMarker[vIdxGlobal] == 0) |
| 271 |
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15124 | boundaryMarker[vIdxGlobal] = gridData->getBoundaryDomainMarker(intersection); |
| 272 | else | ||
| 273 | { | ||
| 274 |
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53763 | if (boundaryMarker[vIdxGlobal] > gridData->getBoundaryDomainMarker(intersection)) |
| 275 |
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336 | boundaryMarker[vIdxGlobal] = gridData->getBoundaryDomainMarker(intersection); |
| 276 | } | ||
| 277 | } | ||
| 278 | } | ||
| 279 | } | ||
| 280 | |||
| 281 | // In a parallel setting, it is possible that not all boundary vertices | ||
| 282 | // will be reached on each process by the procedure above that loops | ||
| 283 | // over the boundary intersections and their vertices. This mandates the | ||
| 284 | // following synchronization. | ||
| 285 |
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7 | if (gridView.comm().size() > 1) |
| 286 | { | ||
| 287 | 4 | VertexHandleNonZeroMin<GridView> dataHandle(boundaryMarker, gridView); | |
| 288 | if constexpr (Detail::canCommunicate<typename GridView::Traits::Grid, GridView::dimension>) | ||
| 289 | 4 | gridView.communicate(dataHandle, | |
| 290 | Dune::InteriorBorder_All_Interface, | ||
| 291 | Dune::ForwardCommunication); | ||
| 292 | else | ||
| 293 | DUNE_THROW(Dune::InvalidStateException, "Cannot call getBoundaryMarkers_ on multiple processes for a grid that cannot communicate codim-" << GridView::dimension << "-entities"); | ||
| 294 | } | ||
| 295 | 7 | } | |
| 296 | }; | ||
| 297 | |||
| 298 | } // end namespace Dumux | ||
| 299 | |||
| 300 | #endif | ||
| 301 |