GCC Code Coverage Report


Directory: ../../../builds/dumux-repositories/
File: /builds/dumux-repositories/dumux/dumux/porenetwork/common/pnmvtkoutputmodule.hh
Date: 2024-05-04 19:09:25
Exec Total Coverage
Lines: 37 38 97.4%
Functions: 46 58 79.3%
Branches: 67 124 54.0%

Line Branch Exec Source
1 // // -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
2 // vi: set et ts=4 sw=4 sts=4:
3 //
4 // SPDX-FileCopyrightInfo: Copyright © DuMux Project contributors, see AUTHORS.md in root folder
5 // SPDX-License-Identifier: GPL-3.0-or-later
6 //
7 /*!
8 * \file
9 * \ingroup PoreNetworkModels
10 * \copydoc Dumux::PoreNetwork::VtkOutputModule
11 */
12
13 #ifndef DUMUX_PNM_VTK_OUTPUT_MODULE_HH
14 #define DUMUX_PNM_VTK_OUTPUT_MODULE_HH
15
16 #include <dumux/io/vtkoutputmodule.hh>
17 #include "velocityoutput.hh"
18
19 namespace Dumux::PoreNetwork {
20
21 /*!
22 * \ingroup PoreNetworkModels
23 * \brief Adds vtk output fields specific to pore-network models.
24 */
25 template<class GridVariables, class FluxVariables, class SolutionVector>
26 class VtkOutputModule : public Dumux::VtkOutputModule<GridVariables, SolutionVector>
27 {
28 using ParentType = Dumux::VtkOutputModule<GridVariables, SolutionVector>;
29 using Scalar = typename GridVariables::Scalar;
30 using FluxVarsCache = typename GridVariables::GridFluxVariablesCache::FluxVariablesCache;
31
32 struct ThroatFluxDataInfo { std::function<Scalar(const FluxVariables&, const FluxVarsCache&)> get; std::string name; };
33
34 public:
35
36 //! The constructor
37 22 VtkOutputModule(const GridVariables& gridVariables,
38 const SolutionVector& sol,
39 const std::string& name,
40 const std::string& paramGroup = "",
41 Dune::VTK::DataMode dm = Dune::VTK::conforming,
42 bool verbose = true)
43
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22 : ParentType(gridVariables, sol, name, paramGroup, dm, verbose)
44 {
45 if constexpr (GridVariables::VolumeVariables::numFluidPhases() >= 1)
46 {
47 // enable velocity output per default
48 using VelocityOutput = VelocityOutput<GridVariables, FluxVariables>;
49
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38 this->addVelocityOutput(std::make_shared<VelocityOutput>(gridVariables));
50 }
51 19 }
52
53 //! Output a scalar flux variable related to pore throats. This is basically a wrapper for the ParentType's addField method.
54 //! \param f A function taking a Problem, FluxVariables and FluxVarsCache object and returning the desired scalar
55 //! \param name The name of the vtk field
56 100 void addFluxVariable(std::function<Scalar(const FluxVariables&, const FluxVarsCache&)>&& f, const std::string& name)
57 {
58
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100 throatFluxDataInfo_.push_back(ThroatFluxDataInfo{f, name});
59 300 const auto numElems = problem().gridGeometry().gridView().size(0);
60
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200 throatFluxData_.push_back(std::vector<Scalar>(numElems));
61 300 ParentType::addField(throatFluxData_.back(), throatFluxDataInfo_.back().name, Vtk::FieldType::element);
62 100 }
63
64 //! Gather and process all required data and write them to a vtk file.
65 510 void write(double time, Dune::VTK::OutputType type = Dune::VTK::ascii)
66 {
67 1530 const auto gridView = problem().gridGeometry().gridView();
68 510 const auto numElems = gridView.size(0);
69
70 // resize all fields
71
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4261 for (auto& data : throatFluxData_)
72 2731 data.resize(numElems);
73
74 1020 auto fvElementGeometry = localView(problem().gridGeometry());
75
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1277 auto elemVolVars = localView(this->gridVariables().curGridVolVars());
76
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1526 auto elemFluxVarsCache = localView(this->gridVariables().gridFluxVarsCache());
77 // iterate over all elements
78
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176428 for (const auto& element : elements(gridView, Dune::Partitions::interior))
79 {
80
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451170 const auto eIdx = problem().gridGeometry().elementMapper().index(element);
81
82 // make sure FVElementGeometry & vol vars are bound to the element
83
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150390 fvElementGeometry.bindElement(element);
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150390 elemVolVars.bind(element, fvElementGeometry, this->sol());
85
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150390 elemFluxVarsCache.bind(element, fvElementGeometry, elemVolVars);
86
87 // treat the throat flux related data
88 std::size_t dataIdx = 0;
89
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300780 for (auto&& scvf : scvfs(fvElementGeometry))
90 {
91 150390 if (!scvf.boundary())
92 {
93 150390 FluxVariables fluxVars;
94 150390 fluxVars.init(problem(), element, fvElementGeometry, elemVolVars, scvf, elemFluxVarsCache);
95
96 150390 dataIdx = 0;
97
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1095618 for(auto& data : throatFluxData_)
98
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3002776 data[eIdx] = throatFluxDataInfo_[dataIdx++].get(fluxVars, elemFluxVarsCache[scvf]);
99 }
100 }
101 }
102
103 // call the ParentType's write method to write out all data
104
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510 ParentType::write(time, type);
105
106 // empty the data containers in order to save some memory
107 auto clearAndShrink = [] (auto& data)
108 {
109
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80 data.clear();
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2731 data.shrink_to_fit();
111 };
112
113
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4261 for (auto& data : throatFluxData_)
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5462 clearAndShrink(data);
115 510 }
116
117 //! Return a reference to the problem
118
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227634 const auto& problem() const { return ParentType::problem(); }
119
120 private:
121 std::vector<ThroatFluxDataInfo> throatFluxDataInfo_;
122 std::list<std::vector<Scalar>> throatFluxData_;
123 };
124
125 } //namespace Dumux::PoreNetwork
126
127 #endif
128