GCC Code Coverage Report


Directory: ../../../builds/dumux-repositories/
File: /builds/dumux-repositories/dumux/dumux/discretization/walldistance.hh
Date: 2024-09-21 20:52:54
Exec Total Coverage
Lines: 82 88 93.2%
Functions: 169 310 54.5%
Branches: 195 525 37.1%

Line Branch Exec Source
1 // -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
2 // vi: set et ts=4 sw=4 sts=4:
3 //
4 // SPDX-FileCopyrightInfo: Copyright © DuMux Project contributors, see AUTHORS.md in root folder
5 // SPDX-License-Identifier: GPL-3.0-or-later
6 //
7 /*!
8 * \file
9 * \ingroup Discretization
10 * \copydoc Dumux::WallDistance
11 */
12 #ifndef DUMUX_DISCRETIZATION_WALL_DISTANCE_HH
13 #define DUMUX_DISCRETIZATION_WALL_DISTANCE_HH
14
15 #include <vector>
16
17 #include <dune/common/parallel/mpihelper.hh>
18 #include <dune/common/shared_ptr.hh>
19 #include <dune/common/reservedvector.hh>
20 #include <dune/grid/common/partitionset.hh>
21
22 #include <dumux/common/tag.hh>
23 #include <dumux/common/indextraits.hh>
24 #include <dumux/parallel/parallel_for.hh>
25 #include <dumux/geometry/distancefield.hh>
26
27 namespace Dumux {
28
29 /*!
30 * \ingroup Discretization
31 * \brief Class to calculate the wall distance at every element or vertex of a grid
32 * \tparam GridGeometry The grid geometry.
33 * \tparam DistanceField The type of distance field to use (parameterized with the geometry type)
34 */
35 template<class GridGeometry, template<class> class DistanceField = AABBDistanceField>
36 class WallDistance
37 {
38 using GridView = typename GridGeometry::GridView;
39 using GridIndexType = typename IndexTraits<GridView>::GridIndex;
40 using SubControlVolumeFace = typename GridGeometry::SubControlVolumeFace;
41 using FVElementGeometry = typename GridGeometry::LocalView;
42 using Element = typename GridGeometry::GridView::template Codim<0>::Entity;
43 using Scalar = typename GridView::Grid::ctype;
44 using GlobalPosition = typename SubControlVolumeFace::GlobalPosition;
45
46 static constexpr int dim = GridView::dimension;
47 static constexpr int dimWorld = GridView::dimensionworld;
48 static_assert(dim == dimWorld, "Wall distances cannot be computed for embedded surface or network domains.");
49
50 using CornerStorage = Dune::ReservedVector<GlobalPosition, (1<<(GridView::dimension-1))>;
51
52 // We use a simplified geometry type here which allows much easier MPI communication
53 // for parallel runs compared to the Dune geometry types (due to fixed-size storage).
54 // This type only implements a minimal part of the Geometry interface.
55 struct SimpleGeometry
56 {
57 19200 SimpleGeometry() = default;
58 42578 SimpleGeometry(CornerStorage&& corners)
59 42578 : corners_(std::move(corners))
60 42578 , center_(0.0)
61 {
62
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204014 for (int i = 0; i < corners_.size(); ++i)
63 484308 center_ += corners_[i];
64 42578 center_ /= corners_.size();
65 42578 }
66
67 using GlobalCoordinate = GlobalPosition;
68 using ctype = typename GlobalCoordinate::value_type;
69 static constexpr int coorddimension = GridView::dimensionworld;
70 static constexpr int mydimension = GridView::dimension-1;
71
72 std::size_t corners() const
73
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834845 { return corners_.size(); }
74
75 const auto& corner(int i) const
76 4010570 { return corners_[i]; }
77
78 const auto& center() const
79 { return center_; }
80
81 private:
82 CornerStorage corners_;
83 GlobalCoordinate center_;
84 };
85
86 79536 struct WallDataImpl
87 {
88 GridIndexType eIdx;
89 GridIndexType scvfIdx;
90 GlobalPosition scvfOuterNormal;
91 int rank; // for parallel runs
92 };
93
94 struct ElementCenters {};
95 struct VertexCenters {};
96
97 public:
98 static constexpr auto atElementCenters = Utility::Tag<ElementCenters>{};
99 static constexpr auto atVertexCenters = Utility::Tag<VertexCenters>{};
100 using WallData = WallDataImpl;
101
102 /*!
103 * \brief Constructs a new wall distance object
104 * \param gridGeometry the grid geometry of the grid
105 * \param tag the policy (either WallDistance::atElementCenters or WallDistance::atVertexCenters)
106 * \param select a selection functor taking an scvf and returning bool signifying whether the scvfs is part of the wall
107 */
108 template<class LocationTag, class ScvfSelectionFunctor>
109 69 WallDistance(std::shared_ptr<const GridGeometry> gridGeometry, LocationTag tag, const ScvfSelectionFunctor& select)
110
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207 : gridGeometry_(gridGeometry)
111 {
112
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69 initializeWallDistance_(select, tag);
113 69 }
114
115 /*!
116 * \brief Constructs a new wall distance object
117 * \param gridGeometry the grid geometry of the grid
118 * \param tag the policy (either WallDistance::atElementCenters or WallDistance::atVertexCenters)
119 * \note selects all boundary scvfs as wall faces
120 */
121 template<class LocationTag>
122 20 WallDistance(std::shared_ptr<const GridGeometry> gridGeometry, LocationTag tag)
123
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40 : WallDistance(gridGeometry, tag, [](const FVElementGeometry& fvGeometry, const SubControlVolumeFace& scvf) { return true; }) {}
124
125 //! caller has to make sure the lifetime of grid geometry exceeds the lifetime of wall distance
126 template<class LocationTag, class ScvfSelectionFunctor>
127 49 WallDistance(const GridGeometry& gridGeometry, LocationTag tag, const ScvfSelectionFunctor& select)
128
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98 : WallDistance(Dune::stackobject_to_shared_ptr(gridGeometry), tag, select) {}
129
130 //! caller has to make sure the lifetime of grid geometry exceeds the lifetime of wall distance
131 template<class LocationTag>
132 20 WallDistance(const GridGeometry& gridGeometry, LocationTag tag)
133
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40 : WallDistance(Dune::stackobject_to_shared_ptr(gridGeometry), tag) {}
134
135 /*!
136 * \brief Returns a vector storing the distance from each DOF location to the nearest wall.
137 * For the atElementCenter policy, this is the distance from the element center to the nearest wall.
138 * For the atVertexCenter policy, this is the distance from the vertex to the nearest wall.
139 */
140 const std::vector<Scalar>& wallDistance() const
141 { return distance_; }
142
143 /*!
144 * \brief Returns a vector storing additional information about the nearest scvf on the wall (element index and scvf index).
145 * For the atElementCenter policy, this information is given for each element
146 * For the atVertexCenter policy, this information is given for each vertex.
147 */
148 const std::vector<WallData>& wallData() const
149 { return wallData_; }
150
151 private:
152 /*!
153 * \brief Perform the actual calculation of wall distances.
154 * \param considerFace Function object (e.g. a lambda) that determines whether a certain scvf shall be considered
155 * for the calculation of wall distances.
156 * \param loc Location a which the distance to the wall shall be calculated (elementCenter or vertex)
157 */
158 template<class ConsiderFaceFunction, class LocationTag>
159 69 void initializeWallDistance_(const ConsiderFaceFunction& considerFace, LocationTag loc)
160 {
161 69 const std::size_t numSamplingPoints = (loc == atElementCenters)
162 187 ? gridGeometry_->gridView().size(0)
163 60 : gridGeometry_->gridView().size(dim);
164 // Reset the containers.
165 69 wallData_.resize(numSamplingPoints);
166 69 distance_.resize(numSamplingPoints, std::numeric_limits<Scalar>::max());
167
168
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69 std::vector<SimpleGeometry> wallGeometries;
169
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167 wallGeometries.reserve(gridGeometry_->numBoundaryScvf());
170
171
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138 std::vector<WallData> tempWallData;
172
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167 tempWallData.reserve(gridGeometry_->numBoundaryScvf());
173
174 // Loop over all elements: find all wall scvfs.
175
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146 auto fvGeometry = localView(*gridGeometry_);
176
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98943 for (const auto& element : elements(gridGeometry_->gridView(), Dune::Partitions::interior))
177 {
178
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83696 fvGeometry.bindElement(element);
179
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167392 if (!fvGeometry.hasBoundaryScvf())
180 continue;
181
182
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63258 const auto eIdx = gridGeometry_->elementMapper().index(element);
183
184
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198892 for (const auto& scvf : scvfs(fvGeometry))
185 {
186
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156720 if (scvf.boundary() && considerFace(fvGeometry, scvf))
187 {
188
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49818 const auto& geo = fvGeometry.geometry(scvf);
189 42578 CornerStorage corners;
190
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365450 for (int i = 0; i < geo.corners(); ++i)
191 181916 corners.push_back(geo.corner(i));
192
193
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42578 wallGeometries.emplace_back(std::move(corners));
194
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42578 tempWallData.push_back(WallData{
195
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127734 eIdx, scvf.index(), scvf.unitOuterNormal(), gridGeometry_->gridView().comm().rank()
196 });
197 }
198 }
199 }
200
201 #if HAVE_MPI
202 // Handle parallel runs. We need to prepare a global vector of wall geometries,
203 // containing the wall geometries of each process in order to get a correct distance field.
204
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207 const bool isParallel = gridGeometry_->gridView().comm().size() > 1;
205
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138 std::vector<SimpleGeometry> globalWallGeometries;
206
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138 std::vector<WallData> globalTempWallData;
207
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158 const auto distanceField = [&]
208 {
209 49 if (isParallel)
210 {
211
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16 const auto& communication = gridGeometry_->gridView().comm();
212 16 const int totalNumberOfBoundaryGeometries = communication.sum(wallGeometries.size());
213 8 globalWallGeometries.resize(totalNumberOfBoundaryGeometries);
214 8 globalTempWallData.resize(totalNumberOfBoundaryGeometries);
215
216 // prepare a displacement vector
217 32 std::vector<int> numGeosPerProcLocal{static_cast<int>(wallGeometries.size())};
218
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32 std::vector<int> numGeosPerProcGlobal(communication.size());
219
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24 communication.allgather(numGeosPerProcLocal.data(), 1, numGeosPerProcGlobal.data());
220
221
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40 std::vector<int> disp(communication.size(), 0);
222 8 disp[1] = numGeosPerProcGlobal[0];
223
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8 for (int i = 2; i < numGeosPerProcGlobal.size(); ++i)
224 disp[i] = disp[i-1] + numGeosPerProcGlobal[i-1];
225
226 // concatenate the wall geometries and temp scvf data of each process into a global vector
227
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48 communication.allgatherv(
228 wallGeometries.data(),
229 wallGeometries.size(),
230 globalWallGeometries.data(),
231 numGeosPerProcGlobal.data(),
232 disp.data()
233 );
234
235
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40 communication.allgatherv(
236
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8 tempWallData.data(),
237 tempWallData.size(),
238 globalTempWallData.data(),
239 numGeosPerProcGlobal.data(),
240 disp.data()
241 );
242
243 // pass the global vector of wall geometries to the distance field
244
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8 return DistanceField<SimpleGeometry>(globalWallGeometries);
245 }
246 else
247 41 return DistanceField<SimpleGeometry>(wallGeometries);
248
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49 }();
249 #else
250 const DistanceField<SimpleGeometry> distanceField(wallGeometries);
251 #endif
252
253 // compute sampling points
254
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276 std::vector<GlobalPosition> points(numSamplingPoints);
255 if (loc == atElementCenters)
256
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91203 for (const auto& element : elements(gridGeometry_->gridView()))
257
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79128 points[gridGeometry_->elementMapper().index(element)] = element.geometry().center();
258 else
259
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22064 for (const auto& vertex : vertices(gridGeometry_->gridView()))
260
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14872 points[gridGeometry_->vertexMapper().index(vertex)] = vertex.geometry().corner(0);
261
262 // get the actual distances (this is the most expensive part)
263 if (loc == atElementCenters)
264 {
265 103777 const auto kernel = [&](std::size_t eIdx){
266
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51864 const auto [d, idx] = distanceField.distanceAndIndex(points[eIdx]);
267
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25932 distance_[eIdx] = d;
268 #if HAVE_MPI
269
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25932 wallData_[eIdx] = isParallel ? globalTempWallData[idx] : tempWallData[idx];
270 #else
271 wallData_[eIdx] = tempWallData[idx];
272 #endif
273 };
274
275
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49 runKernel_(numSamplingPoints, kernel);
276 }
277 else
278 {
279 29764 const auto kernel = [&](std::size_t vIdx){
280
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14872 const auto [d, idx] = distanceField.distanceAndIndex(points[vIdx]);
281
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7436 distance_[vIdx] = d;
282 #if HAVE_MPI
283
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7436 wallData_[vIdx] = isParallel ? globalTempWallData[idx] : tempWallData[idx];
284 #else
285 wallData_[vIdx] = tempWallData[idx];
286 #endif
287 };
288
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20 runKernel_(numSamplingPoints, kernel);
290 }
291 69 }
292
293 template<class Kernel>
294 void runKernel_(std::size_t size, const Kernel& kernel)
295 {
296 // parallelize, if we have enough work (enough evaluation points)
297 if (size > 10000)
298 Dumux::parallelFor(size, [&](const std::size_t i){ kernel(i); });
299 else
300 for (std::size_t i = 0; i < size; ++i) kernel(i);
301 }
302
303 std::vector<Scalar> distance_;
304 std::vector<WallData> wallData_;
305 std::shared_ptr<const GridGeometry> gridGeometry_;
306 };
307
308 } // end namespace Dumux
309
310 #endif
311