Index

_

__init__() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) (bayesvalidrox.bayes_inference.discrepancy.Discrepancy method) (bayesvalidrox.bayes_inference.mcmc.MCMC method) (bayesvalidrox.post_processing.post_processing.PostProcessing method) (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.engine.Engine method) (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) (bayesvalidrox.surrogate_models.exploration.Exploration method) (bayesvalidrox.surrogate_models.input_space.InputSpace method) (bayesvalidrox.surrogate_models.inputs.Input method) (bayesvalidrox.surrogate_models.inputs.Marginal method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) (bayesvalidrox.surrogate_models.reg_fast_laplace.RegressionFastLaplace method) (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method) (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method)

A

adaptive_regression() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) adaptPlot() (in module bayesvalidrox.surrogate_models.adaptPlot) add_InputSpace() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method)

add_marginals() (bayesvalidrox.surrogate_models.inputs.Input method) apoly_construction() (in module bayesvalidrox.surrogate_models.apoly_construction) approximate_voronoi() (bayesvalidrox.surrogate_models.exploration.Exploration method)

B

BayesianLinearRegression (class in bayesvalidrox.surrogate_models.bayes_linear) BayesInference (class in bayesvalidrox.bayes_inference.bayes_inference) BayesModelComparison (class in bayesvalidrox.bayes_inference.bayes_model_comparison) bayesvalidrox module bayesvalidrox.bayes_inference module bayesvalidrox.bayes_inference.bayes_inference module bayesvalidrox.bayes_inference.bayes_model_comparison module bayesvalidrox.bayes_inference.discrepancy module bayesvalidrox.bayes_inference.mcmc module bayesvalidrox.post_processing module bayesvalidrox.post_processing.post_processing module bayesvalidrox.pylink module bayesvalidrox.pylink.pylink module bayesvalidrox.surrogate_models module bayesvalidrox.surrogate_models.adaptPlot module bayesvalidrox.surrogate_models.apoly_construction module

bayesvalidrox.surrogate_models.bayes_linear module bayesvalidrox.surrogate_models.engine module bayesvalidrox.surrogate_models.eval_rec_rule module bayesvalidrox.surrogate_models.exp_designs module bayesvalidrox.surrogate_models.exploration module bayesvalidrox.surrogate_models.glexindex module bayesvalidrox.surrogate_models.input_space module bayesvalidrox.surrogate_models.inputs module bayesvalidrox.surrogate_models.orthogonal_matching_pursuit module bayesvalidrox.surrogate_models.reg_fast_ard module bayesvalidrox.surrogate_models.reg_fast_laplace module bayesvalidrox.surrogate_models.sequential_design module bayesvalidrox.surrogate_models.surrogate_models module blockwise_inverse() (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) build_metamodel() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) build_polytypes() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) (bayesvalidrox.surrogate_models.input_space.InputSpace method)

C

cal_model_weight() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) calc_bayes_factors() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) calc_justifiability_analysis() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) calc_model_weights() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) check_accuracy() (bayesvalidrox.post_processing.post_processing.PostProcessing method) check_ranges() (in module bayesvalidrox.surrogate_models.exp_designs) check_reg_quality() (bayesvalidrox.post_processing.post_processing.PostProcessing method) check_valid_inputs() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) (bayesvalidrox.surrogate_models.input_space.InputSpace method) choose_next_sample() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method)

clear() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method) compute_pce_moments() (bayesvalidrox.post_processing.post_processing.PostProcessing method) copy() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method) copy_meta_model_opts() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) corr() (in module bayesvalidrox.surrogate_models.orthogonal_matching_pursuit) corr_loocv_error() (in module bayesvalidrox.surrogate_models.surrogate_models) create_error_model() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) create_inference() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) create_model_error() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) create_psi() (in module bayesvalidrox.surrogate_models.surrogate_models) cross_truncate() (in module bayesvalidrox.surrogate_models.glexindex)

D

Discrepancy (class in bayesvalidrox.bayes_inference.discrepancy)

dual_annealing() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method)

E

EBLinearRegression (class in bayesvalidrox.surrogate_models.bayes_linear) Engine (class in bayesvalidrox.surrogate_models.engine) eval_metamodel() (bayesvalidrox.surrogate_models.engine.Engine method) (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) eval_model() (bayesvalidrox.bayes_inference.mcmc.MCMC method)

eval_model_error() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) eval_rec_rule() (in module bayesvalidrox.surrogate_models.eval_rec_rule) eval_rec_rule_arbitrary() (in module bayesvalidrox.surrogate_models.eval_rec_rule) eval_univ_basis() (in module bayesvalidrox.surrogate_models.eval_rec_rule) ExpDesigns (class in bayesvalidrox.surrogate_models.exp_designs) Exploration (class in bayesvalidrox.surrogate_models.exploration)

F

fit() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method)

fromkeys() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method)

G

gamma_mean() (in module bayesvalidrox.surrogate_models.bayes_linear) gaussian_process_emulator() (in module bayesvalidrox.surrogate_models.surrogate_models) gelman_rubin() (in module bayesvalidrox.bayes_inference.mcmc) generate_dataset() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) generate_ED() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) generate_polynomials() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) generate_samples() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) get() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method) get_exploration_samples() (bayesvalidrox.surrogate_models.exploration.Exploration method) get_mc_samples() (bayesvalidrox.surrogate_models.exploration.Exploration method) get_metadata_routing() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method)

get_params() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) get_sample() (bayesvalidrox.bayes_inference.discrepancy.Discrepancy method) get_vornoi_samples() (bayesvalidrox.surrogate_models.exploration.Exploration method) glexindex() (in module bayesvalidrox.surrogate_models.glexindex)

H

hellinger_distance() (in module bayesvalidrox.surrogate_models.engine) (in module bayesvalidrox.surrogate_models.sequential_design)

I

init_param_space() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) (bayesvalidrox.surrogate_models.input_space.InputSpace method)

Input (class in bayesvalidrox.surrogate_models.inputs) InputSpace (class in bayesvalidrox.surrogate_models.input_space) items() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method)

K

keys() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method)

L

log_likelihood() (bayesvalidrox.bayes_inference.mcmc.MCMC method) log_marginal_like() (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) log_posterior() (bayesvalidrox.bayes_inference.mcmc.MCMC method)

log_prior() (bayesvalidrox.bayes_inference.mcmc.MCMC method) logpdf() (in module bayesvalidrox.surrogate_models.engine) (in module bayesvalidrox.surrogate_models.sequential_design) loo_error() (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method)

M

Marginal (class in bayesvalidrox.surrogate_models.inputs) MCMC (class in bayesvalidrox.bayes_inference.mcmc) MetaModel (class in bayesvalidrox.surrogate_models.surrogate_models) MetaModel.auto_vivification (class in bayesvalidrox.surrogate_models.surrogate_models) model_comparison_all() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) module bayesvalidrox bayesvalidrox.bayes_inference bayesvalidrox.bayes_inference.bayes_inference bayesvalidrox.bayes_inference.bayes_model_comparison bayesvalidrox.bayes_inference.discrepancy bayesvalidrox.bayes_inference.mcmc bayesvalidrox.post_processing bayesvalidrox.post_processing.post_processing bayesvalidrox.pylink bayesvalidrox.pylink.pylink bayesvalidrox.surrogate_models bayesvalidrox.surrogate_models.adaptPlot bayesvalidrox.surrogate_models.apoly_construction bayesvalidrox.surrogate_models.bayes_linear bayesvalidrox.surrogate_models.engine bayesvalidrox.surrogate_models.eval_rec_rule bayesvalidrox.surrogate_models.exp_designs bayesvalidrox.surrogate_models.exploration bayesvalidrox.surrogate_models.glexindex bayesvalidrox.surrogate_models.input_space bayesvalidrox.surrogate_models.inputs bayesvalidrox.surrogate_models.orthogonal_matching_pursuit bayesvalidrox.surrogate_models.reg_fast_ard bayesvalidrox.surrogate_models.reg_fast_laplace bayesvalidrox.surrogate_models.sequential_design bayesvalidrox.surrogate_models.surrogate_models

N

normpdf() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) (bayesvalidrox.bayes_inference.mcmc.MCMC method)

O

OrthogonalMatchingPursuit (class in bayesvalidrox.surrogate_models.orthogonal_matching_pursuit)

P

pca_transformation() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) pcm_sampler() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) perform_bootstrap() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) plot_bayes_factor() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) plot_just_analysis() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) plot_log_BME() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) plot_model_weights() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) plot_moments() (bayesvalidrox.post_processing.post_processing.PostProcessing method) plot_post_params() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) plot_samples() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) plot_seq_design_diagnostics() (bayesvalidrox.post_processing.post_processing.PostProcessing method) poly_rec_coeffs() (in module bayesvalidrox.surrogate_models.eval_rec_rule) pop() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method)

popitem() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method) PostProcessing (class in bayesvalidrox.post_processing.post_processing) predict() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) (bayesvalidrox.surrogate_models.reg_fast_laplace.RegressionFastLaplace method) predict_dist() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) PyLinkForwardModel (class in bayesvalidrox.pylink.pylink) PyLinkForwardModel.OutputData (class in bayesvalidrox.pylink.pylink)

R

random_sampler() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) read_from_file() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) read_observation() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) read_output() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) regression() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) RegressionFastARD (class in bayesvalidrox.surrogate_models.reg_fast_ard)

RegressionFastLaplace (class in bayesvalidrox.surrogate_models.reg_fast_laplace) run_command() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) run_forwardmodel() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) run_model_parallel() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) run_sampler() (bayesvalidrox.bayes_inference.mcmc.MCMC method) run_util_func() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method)

S

score() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) SequentialDesign (class in bayesvalidrox.surrogate_models.sequential_design) set_params() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) set_predict_request() (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method)

set_score_request() (bayesvalidrox.surrogate_models.bayes_linear.BayesianLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.EBLinearRegression method) (bayesvalidrox.surrogate_models.bayes_linear.VBLinearRegression method) (bayesvalidrox.surrogate_models.orthogonal_matching_pursuit.OrthogonalMatchingPursuit method) (bayesvalidrox.surrogate_models.reg_fast_ard.RegressionFastARD method) setdefault() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method) setup() (bayesvalidrox.bayes_inference.bayes_model_comparison.BayesModelComparison method) setup_inference() (bayesvalidrox.bayes_inference.bayes_inference.BayesInference method) sobol_indices() (bayesvalidrox.post_processing.post_processing.PostProcessing method) start_engine() (bayesvalidrox.surrogate_models.engine.Engine method) start_seqdesign() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method) subdomain() (in module bayesvalidrox.surrogate_models.sequential_design)

T

tradeoff_weights() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method) train_error_model() (bayesvalidrox.bayes_inference.mcmc.MCMC method) train_normal() (bayesvalidrox.surrogate_models.engine.Engine method)

train_seq_design() (bayesvalidrox.surrogate_models.engine.Engine method) train_sequential() (bayesvalidrox.surrogate_models.engine.Engine method) transform() (bayesvalidrox.surrogate_models.exp_designs.ExpDesigns method) (bayesvalidrox.surrogate_models.input_space.InputSpace method)

U

uMBridge_model() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) univ_basis_vals() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method) update() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method) update_input_params() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method) update_pce_coeffs() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel method)

update_precisions() (in module bayesvalidrox.surrogate_models.reg_fast_ard) util_AlphOptDesign() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method) util_BayesianActiveDesign() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method) util_BayesianDesign() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method) util_VarBasedDesign() (bayesvalidrox.surrogate_models.sequential_design.SequentialDesign method)

V

valid_metamodel() (bayesvalidrox.post_processing.post_processing.PostProcessing method)

values() (bayesvalidrox.surrogate_models.surrogate_models.MetaModel.auto_vivification method) VBLinearRegression (class in bayesvalidrox.surrogate_models.bayes_linear)

W

within_range() (in module bayesvalidrox.pylink.pylink)

Z

zip_subdirs() (bayesvalidrox.pylink.pylink.PyLinkForwardModel method)